Hello Puneet, I saw the pics of your Grand somewhere on the forum and I must tell you that you and your car; both looked awesome in the frame. Ala, made for each other
Let me try to answer all your questions one by one:
1) During the traffic stops, it is advisable to keep clutch and brake pressed. Why so? Actually while driving in traffic, if the number of stops is more but the stopping time is hardly 5-10 seconds then better not keep slotting around from first to neutral and back. In case of red lights, traffic jam etc you can follow the rule of turning to neutral. I personally follow the rule of turning engine off too in case of 120 second red lights and time of at least 90 seconds remaining.
2) For now you can use handbrake but the situation actually gets very tricky when you are in the middle of a traffic jam on an incline. For now, use the hand brake but develop the clutch-accelerator balance too with time. How to develop that? Practice, practice and practice. Where to do? Of course not on the flyovers of expressway. This Sunday, take 4 of your friends and hit the NH8. Just ahead of Manesar is a wide curved incline, there you can do some proper practice.
3) Shift directly from fifth to second, no issue. Rest I would recommend use engine braking+rev matching type of shifting. How? When you see the speed breaker, just leave the throttle and let the vehicle slow down. Now keep shifting down according to the speed and let the engine braking do a good part of slowing down. Rest in case of sudden slowing down, it's the brake pedal to hit and shift down directly to third, second or first based on the speed to which you have slowed down.
Getting jerks while shifting from first to second? No issues at all, next time when you do that, just press the accelerator slightly (needle around 2000 rpm) and gradually release the clutch, the transition will be super smooth and your passengers wont even recognise if the gear is changed.